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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834981.1_cds_XP_016505779.1_19080
CDS Infomation

[gene=LOC107823602] [db_xref=GeneID:107823602] [protein=protein ECERIFERUM 1-like] [protein_id=XP_016505779.1] [location=complement(join(198169..198333,198913..199086,199255..199347,201342..201542,201840..201947,202038..202413,202959..203178,203262..203494,203959..204182,204997..205056))] [gbkey=CDS]
Sequence

ATGGCTACTACTCCTGGATTTCTCACTGATTGGCCTTGGAAGCACCTCGGAAGCTTTAAG
TACGTGATTTTGGCTCCATGGATAGCTCACAGCGTTTATTGTTTAGCAACCAAAGAGCAA
CATGAGACAGACTCCACCAATTTGCTCATACTTCCTTTTCTACTCTCAAGGATGCTTCAC
AACCAGCTCTGGATTAGCTTTTCTCGTTATCGAACAGCCAAAGGCAACAACCGCATTGTT
GATAAAGGCATCGAGTTTGATCAAGTCGACAGAGAAAGCAACTGGGACGATCAGATAATA
TTGAACGGGATTTTGCTTTATGTGTTTAATACGATGAGTTCAGCAGCTTCAAACTTGCCA
TTGTGGAGATCAGACGGTGTAATCATGTCAATATTTCTTCATGCGGGACCTGTTGAATTT
CTCTATTATTGGCTCCACAGATCTTTGCACCATCATTATCTCTACTCTCGTTATCATTCT
CATCATCACTCTTCTATTGCAACTGAGCCCATCACATCTGTGATTCATCCGTTTGCTGAG
CATATAGCATATTTCCTGCTATTTGGTATTCCAACATTATCAACAGTGTTCACGGGGGCT
GCTTCGCTGGCTTCTCTCTTTGGCTACATTACCTATATTGATCTCATGAATAACATGGGG
CACTGCAACTTTGAGTTCATTCCCAAGTGGATTTTCTCCATCTTTCCCCCTCTCAAATAC
TTTATGTATACGCCCTCGTTTCACTCCCTGCACCATACTCAATTCCGAACAAATTATTCG
CTCTTTATGCCAATCTATGACTACATCTATGGGACCCTGGACAAGTCTACTGATTCAATA
TATGAAAAATCACTAAAAAGGCAAGAAGATTCACCAGATGTGGTACATTTGACACATTTG
ACAACCCCAGAATCCATTTACCATCTCAGGCTAGGATTTTCCTCATTGGCCTCAATGCCT
CAAAACAAAAAATGGTACATTTGGTTCATGTGGCCACTCACTTTGTGGACTATGATCACC
AACTGTATCTATGGACGCACTTTCATTTTGGAGAGAAATAACTTGGAAAAGTTTCAATTT
CAATCTTGGTCCATACCAAGATACAATTTACAGTACTTGTTGAATTGGCAATCACAAGCT
ATTAACAACTTGATAGAGGATGCTATATTACAAGCAGAAGAAAAAGGTGCCAAGGTCTTA
AGTCTTGGCCTTCTAAACCAGGGTGAGGAACTTAATAGAAATGGAGAAATTTACATAGAG
AGGCACCCCAAAATCAAGATCAAGGTGGTGGATGGAAGTAGCTTGGCAGTTGCTGTTGCG
CTAAACAGCATCCCCAAAGGAACAACACAAGTGTTTCTCAGAGGAAACCTCACTAAAATT
GCCTTTTCTATTGCTTCTTCTCTGTGTCAAAGGGGCATCCAGGTGGCTACTTTGTACGAA
AGTGACTACGAGAAACTTAAACTTGCTACTAGTTGTCAGGGTAATTTCGTGCTGTCAAAG
ACATTTGATCAGAAGATATGGGTAGTTGGAGATGGATTAACAGAGGAAGAACAAATGAAG
GCAGCAAAAGGGACACTTTTCTTCCCATTCTCGCAGCTGCCTCCTAAAAAAGCTCGCCAC
GACTGTTTCTATCACCACCCTCCTGCAATGCTAGCTCCCCCTTCTCTACAAAATTTGCAT
GCTTGTGAGAATTGGCTACCAAGAAGAGCAATGAGTGCGCCAAGAGTGGCTGGAATTGTG
CATGCCTTAGAAGGATGGGATGTACATGAGTGTGGAGACAATATGATTGACATTGACAAG
ATTTGGGAAGCCAGCCTAAAGCATGGATTCAAACCTTTGGCCTTTGCTGAATGA

Peptide Sequence

PEP ID

XP_016505779.1
PEP Infomation

PREDICTED: protein ECERIFERUM 1-like [Nicotiana tabacum]
Sequence

MATTPGFLTDWPWKHLGSFKYVILAPWIAHSVYCLATKEQHETDSTNLLILPFLLSRMLH
NQLWISFSRYRTAKGNNRIVDKGIEFDQVDRESNWDDQIILNGILLYVFNTMSSAASNLP
LWRSDGVIMSIFLHAGPVEFLYYWLHRSLHHHYLYSRYHSHHHSSIATEPITSVIHPFAE
HIAYFLLFGIPTLSTVFTGAASLASLFGYITYIDLMNNMGHCNFEFIPKWIFSIFPPLKY
FMYTPSFHSLHHTQFRTNYSLFMPIYDYIYGTLDKSTDSIYEKSLKRQEDSPDVVHLTHL
TTPESIYHLRLGFSSLASMPQNKKWYIWFMWPLTLWTMITNCIYGRTFILERNNLEKFQF
QSWSIPRYNLQYLLNWQSQAINNLIEDAILQAEEKGAKVLSLGLLNQGEELNRNGEIYIE
RHPKIKIKVVDGSSLAVAVALNSIPKGTTQVFLRGNLTKIAFSIASSLCQRGIQVATLYE
SDYEKLKLATSCQGNFVLSKTFDQKIWVVGDGLTEEEQMKAAKGTLFFPFSQLPPKKARH
DCFYHHPPAMLAPPSLQNLHACENWLPRRAMSAPRVAGIVHALEGWDVHECGDNMIDIDK
IWEASLKHGFKPLAFAE

Transcript Sequence

Gene sequence data has not been registered.